GrippeEspagneV1, Main, Exploration, bibRecord, 000026

Long-term avian influenza virus epidemiology in a small Spanish wetland ecosystem is driven by the breeding Anseriformes community.

Identifieur interne : 000026 ( Main/Exploration ); précédent : 000025; suivant : 000027

Long-term avian influenza virus epidemiology in a small Spanish wetland ecosystem is driven by the breeding Anseriformes community.

Auteurs : Olalla Torrontegi [Espagne] ; Vega Alvarez [Espagne] ; Pelayo Acevedo [Espagne] ; Xeider Gerrikagoitia [Espagne] ; Ursula Höfle [Espagne] ; Marta Barral [Espagne]

Source :

Veterinary research [ 1297-9716 ] ; 2019.

RBID : pubmed:30654831

Descripteurs français

KwdFr :
- Animaux (MeSH), Anseriformes (MeSH), Codage à barres de l'ADN pour la taxonomie (MeSH), Complexe IV de la chaîne respiratoire (analyse), Espagne (épidémiologie), Grippe chez les oiseaux (virologie), Grippe chez les oiseaux (épidémiologie), Oiseaux (MeSH), Protéines aviaires (analyse), Protéines mitochondriales (analyse), Prévalence (MeSH), Virus de la grippe A (isolement et purification), Zones humides (MeSH), Études longitudinales (MeSH).
MESH :
- analyse : Complexe IV de la chaîne respiratoire, Protéines aviaires, Protéines mitochondriales.
- isolement et purification : Virus de la grippe A.
- virologie : Grippe chez les oiseaux.
- épidémiologie : Espagne, Grippe chez les oiseaux.
- Animaux, Anseriformes, Codage à barres de l'ADN pour la taxonomie, Oiseaux, Prévalence, Zones humides, Études longitudinales.
Wicri :
- geographic : Espagne.

English descriptors

KwdEn :
- Animals (MeSH), Anseriformes (MeSH), Avian Proteins (analysis), Birds (MeSH), DNA Barcoding, Taxonomic (MeSH), Electron Transport Complex IV (analysis), Influenza A virus (isolation & purification), Influenza in Birds (epidemiology), Influenza in Birds (virology), Longitudinal Studies (MeSH), Mitochondrial Proteins (analysis), Prevalence (MeSH), Spain (epidemiology), Wetlands (MeSH).
MESH :
- chemical , analysis : Avian Proteins, Electron Transport Complex IV, Mitochondrial Proteins.
- geographic , epidemiology : Spain.
- epidemiology : Influenza in Birds.
- isolation & purification : Influenza A virus.
- virology : Influenza in Birds.
- Animals, Anseriformes, Birds, DNA Barcoding, Taxonomic, Longitudinal Studies, Prevalence, Wetlands.

Abstract

During 2007-2009 and 2012-2014, avian influenza virus (AIV) was studied in a wild avian community of a northern Spanish wetland using non-invasive sampling methods and host identification by COI barcoding. The aim of this longitudinal study was to evaluate AIV dynamics in a natural wetland ecosystem, taking into account both virological aspects and ecological traits of hosts. Global AIV prevalence decreased significantly during the second sampling period (0.3%) compared to the first (6.6%). Circulating subtype distributions were also different between periods, with a noteworthy H5 and H7 subtype richness during the first sampling period. Mallard Anas platyrhynchos was identified as the main AIV host, although not all positive samples could be ascribed to the host. We modelled AIV prevalence with regard to the avian host community composition and meteorological data from the wetland. Statistical analysis revealed seasonal differences in AIV detection, with higher prevalence during the breeding season compared to other phenological events. The model also shows that the lower AIV prevalence during the second study period was associated with a significant reduction of breeding Anseriformes in the wetland, revealing a long-term fluctuation of AIV prevalence driven by the breeding Anseriformes community. This longitudinal study on AIV epidemiology in a natural ecosystem reveals that although prevalence follows seasonal and annual patterns, long-term prevalence fluctuation is linked to the breeding community composition and size. These results are relevant to understanding the influence of host ecology on pathogen transmission for preventing and managing influenza emergence.

DOI: 10.1186/s13567-019-0623-5
PubMed: 30654831
PubMed Central: PMC6337815

Affiliations:

Espagne

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 00029
to stream Main, to step Curation: 000029

Le document en format XML

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<term>Anseriformes (MeSH)</term>
<term>Avian Proteins (analysis)</term>
<term>Birds (MeSH)</term>
<term>DNA Barcoding, Taxonomic (MeSH)</term>
<term>Electron Transport Complex IV (analysis)</term>
<term>Influenza A virus (isolation & purification)</term>
<term>Influenza in Birds (epidemiology)</term>
<term>Influenza in Birds (virology)</term>
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<term>Anseriformes (MeSH)</term>
<term>Codage à barres de l'ADN pour la taxonomie (MeSH)</term>
<term>Complexe IV de la chaîne respiratoire (analyse)</term>
<term>Espagne (épidémiologie)</term>
<term>Grippe chez les oiseaux (virologie)</term>
<term>Grippe chez les oiseaux (épidémiologie)</term>
<term>Oiseaux (MeSH)</term>
<term>Protéines aviaires (analyse)</term>
<term>Protéines mitochondriales (analyse)</term>
<term>Prévalence (MeSH)</term>
<term>Virus de la grippe A (isolement et purification)</term>
<term>Zones humides (MeSH)</term>
<term>Études longitudinales (MeSH)</term>
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<term>Electron Transport Complex IV</term>
<term>Mitochondrial Proteins</term>
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<keywords scheme="MESH" qualifier="analyse" xml:lang="fr"><term>Complexe IV de la chaîne respiratoire</term>
<term>Protéines aviaires</term>
<term>Protéines mitochondriales</term>
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<keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Influenza in Birds</term>
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<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Influenza A virus</term>
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<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Virus de la grippe A</term>
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<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Grippe chez les oiseaux</term>
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<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Influenza in Birds</term>
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<front><div type="abstract" xml:lang="en">During 2007-2009 and 2012-2014, avian influenza virus (AIV) was studied in a wild avian community of a northern Spanish wetland using non-invasive sampling methods and host identification by COI barcoding. The aim of this longitudinal study was to evaluate AIV dynamics in a natural wetland ecosystem, taking into account both virological aspects and ecological traits of hosts. Global AIV prevalence decreased significantly during the second sampling period (0.3%) compared to the first (6.6%). Circulating subtype distributions were also different between periods, with a noteworthy H5 and H7 subtype richness during the first sampling period. Mallard Anas platyrhynchos was identified as the main AIV host, although not all positive samples could be ascribed to the host. We modelled AIV prevalence with regard to the avian host community composition and meteorological data from the wetland. Statistical analysis revealed seasonal differences in AIV detection, with higher prevalence during the breeding season compared to other phenological events. The model also shows that the lower AIV prevalence during the second study period was associated with a significant reduction of breeding Anseriformes in the wetland, revealing a long-term fluctuation of AIV prevalence driven by the breeding Anseriformes community. This longitudinal study on AIV epidemiology in a natural ecosystem reveals that although prevalence follows seasonal and annual patterns, long-term prevalence fluctuation is linked to the breeding community composition and size. These results are relevant to understanding the influence of host ecology on pathogen transmission for preventing and managing influenza emergence.</div>
</front>
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<Abstract><AbstractText>During 2007-2009 and 2012-2014, avian influenza virus (AIV) was studied in a wild avian community of a northern Spanish wetland using non-invasive sampling methods and host identification by COI barcoding. The aim of this longitudinal study was to evaluate AIV dynamics in a natural wetland ecosystem, taking into account both virological aspects and ecological traits of hosts. Global AIV prevalence decreased significantly during the second sampling period (0.3%) compared to the first (6.6%). Circulating subtype distributions were also different between periods, with a noteworthy H5 and H7 subtype richness during the first sampling period. Mallard Anas platyrhynchos was identified as the main AIV host, although not all positive samples could be ascribed to the host. We modelled AIV prevalence with regard to the avian host community composition and meteorological data from the wetland. Statistical analysis revealed seasonal differences in AIV detection, with higher prevalence during the breeding season compared to other phenological events. The model also shows that the lower AIV prevalence during the second study period was associated with a significant reduction of breeding Anseriformes in the wetland, revealing a long-term fluctuation of AIV prevalence driven by the breeding Anseriformes community. This longitudinal study on AIV epidemiology in a natural ecosystem reveals that although prevalence follows seasonal and annual patterns, long-term prevalence fluctuation is linked to the breeding community composition and size. These results are relevant to understanding the influence of host ecology on pathogen transmission for preventing and managing influenza emergence.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Torrontegi</LastName>
<ForeName>Olalla</ForeName>
<Initials>O</Initials>
<AffiliationInfo><Affiliation>Animal Health Department, NEIKER-Instituto Vasco de Investigación y Desarrollo Agrario, Parque tecnológico de Bizkaia P-812, 48160, Derio, Bizkaia, Spain.</Affiliation>
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<Initials>V</Initials>
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</AffiliationInfo>
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<AffiliationInfo><Affiliation>Animal Health Department, NEIKER-Instituto Vasco de Investigación y Desarrollo Agrario, Parque tecnológico de Bizkaia P-812, 48160, Derio, Bizkaia, Spain. mbarral@neiker.eus.</Affiliation>
</AffiliationInfo>
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<Agency>Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria</Agency>
<Country></Country>
</Grant>
<Grant><GrantID>Predoctoral grant</GrantID>
<Agency>Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria</Agency>
<Country></Country>
</Grant>
<Grant><GrantID>Ramon y Cajal contract (RYC-2012-11970)</GrantID>
<Agency>Ministerio de Economía, Industria y Competitividad, Gobierno de España</Agency>
<Country></Country>
</Grant>
<Grant><GrantID>Ramon y Cajal contract (RYC-2012-11970)</GrantID>
<Agency>Universidad de Castilla-La Mancha (ES)</Agency>
<Country></Country>
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Long-term avian influenza virus epidemiology in a small Spanish wetland ecosystem is driven by the breeding Anseriformes community.

Long-term avian influenza virus epidemiology in a small Spanish wetland ecosystem is driven by the breeding Anseriformes community.

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